In HRF05, 140 high-confidence SNPs were identified as being significantly associated with TGW using Strategy 1 and, of these, 126 SNPs were grouped into 9 high-confidence QTL (Supplemental Table S4). Two combined QTL were identified using Strategy 2, 1 of which overlapped with a high-confidence QTL, leading to 10 TGW QTL identified in HRF05. Numbers of SNPs that were significantly associated with TGW within these QTL regions varied from 2 in q2005GW6.1 to 38 in q2005GW7.2. The effect of QTL ranged from -0.21 to + 2.52 (g) with R931945–2-2 alleles increasing TGW in 9 QTL (Supplemental Table S4, Fig. 3). Five of the 10 HRF05 TGW QTL co-located with the HRF04 TGW QTL, resulting in 17 unique non-overlapping TGW QTL across both trials (Table 3, Fig. 4). Twelve TGW QTL were trial specific, including 7 unique in HRF04 and 5 unique in HRF05. However, 3 of the trial specific QTL showed a significant association at p-value < 0.05 with TGW in the alternative trial.
Each rectangular means the region regarding a good TGW QTL
- * Genome places are based on sorghum genome system (v3.step 1.1).
- † NS suggests not very much, NA implies maybe not appropriate.
- ‡ Grains dimensions candidate genes was indeed obtained from a list of 114 cereals dimensions candidate genetics recognized for the Tao mais aussi al. (2017) . Continue reading “Results of TGW QTL towards the Grains Count”